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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8140875 chr22:19840591 C/G POLR2F chr22:38348614-38437922:+ 0.48 5.97 4.68E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G POLR3H chr22:41921808-41940610:- 0.69 6.58 1.26E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G PPIL2 chr22:22020298-22054304:+ 0.82 8.17 2.76E-15 Box Plot
THCA rs8140875 chr22:19840591 C/G RBX1 chr22:41347351-41369313:+ 0.52 6.93 1.4E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G RHBDD3 chr22:29655841-29664198:- 0.56 6.29 7.12E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G RNF215 chr22:30764800-30817760:- 0.66 6.9 1.68E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G SAPS2 chr22:50781760-50883514:+ 0.66 5.89 7.3E-9 Box Plot
THCA rs8140875 chr22:19840591 C/G SELO chr22:50639408-50656045:+ 0.51 6.33 5.77E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G SF3A1 chr22:30727977-30752936:- 0.53 6.28 7.59E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G SGSM3 chr22:40766595-40806293:+ 0.56 6.66 7.34E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G SMARCB1 chr22:24129150-24176703:+ 0.71 6.56 1.39E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G SMCR7L chr22:39896105-39914136:+ 0.6 6.62 9.39E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G SNRPD3 chr22:24951471-25005947:+ 0.69 7.36 8.34E-13 Box Plot
THCA rs8140875 chr22:19840591 C/G SRRD chr22:26879843-26890624:+ 0.74 6.5 1.98E-10 Box Plot
THCA rs8140875 chr22:19840591 C/G TFIP11 chr22:26887191-26908471:- 0.87 7.58 1.82E-13 Box Plot